This option combines Amira's strong capabilities for 3D data visualization, such as hardware-accelerated volume rendering, with specific tools for molecular visualization and analysis, such as molecular surfaces, sequence alignment, configuration density computation and molecule trajectory animation. Due to Amira's innovative user interface, using the features of the Molecular Option is easy. The Amira Molecular Option comes with self-running demos and step-by-step tutorials for the most common molecular visualization tasks.
Windows 32-bit, Windows 64-bit, Mac OS, Linux
The Molecular Option offers state-of-the-art molecular visualization and
several advanced tools for molecular simulation combined with the
high-end Amira features.
AMBER Assisted Model Building with Energy Refinement format
AMF Amira Molecule Format
DX APBS DX electrostatic field file
GROMACS Groningen Machine for Chemical Simulations format
MDL MDL file format saving chemical structures
PDB protein data base file format
PHI Congen PHI Electrostatic field file
PSF/DCD (CHARMM) file format used by CHARMM
Tripos file format used to save Tripos Sybyl mol2 molecules
UniChem file format used by the UniChem molecular software
ZIB Molecular format developed as molecular exchange