From a reconstructed geometry or from any imported 3D data, including time series, the Basic Amira Package delivers a wide range of visualization techniques and interactive manipulation capabilities. Through a comprehensive set of 3D post-processing tools, it offers a highly flexible and powerful 3D visualization and simulation platform.


Windows 32-bit, Windows 64-bit, Mac OS, Linux

Process and Reconstruct

Manipulate your images through a variety of digital filters, interactive editors; reconstruct tissues and regions within your image volumes.

  • Image filtering
  • Surface generation
  • Image segmentation
  • Slice alignment
  • Automatic and manual registration
  • Volume and image sampling
  • Volume cropping
  • Direct volume editing
  • Surface editing
  • Data type conversion
  • Scripting
  • Fusion in 3D MPR viewer
  • Automatic and manual registration in 3D MPR viewer
Visualize and Explore

Fast, interactive and high quality visualization techniques and easy-to-use tools to explore your volumes by clipping, cropping and colormaps.

  • Orthogonal, oblique, curved and bump slicing
  • Shaded multi-resolution volume rendering
  • Surface rendering
  • Isolines and isosurfaces
  • Multichannel image visualization
  • Image fusion
  • Height field
  • Orthogonal projections
  • Visualization of traced filaments
  • 3D ROI selection
  • Clipping and cutting
  • Visualization of time series data
  • 3D MPR viewer to explore complex data sets
Analyze and Quantify

Analyze your volumes with advanced tools for statistical, surface and grid analysis. Interactively perform geometrical measures of distances, angles, surface and volumes. Link Amira with MATLAB to perform simulation and advanced numerical analysis.

  • Material statistics
  • Volume and surface measurement
  • 2D/3D linear measurement and annotation
  • Co-localization analysis
  • Arithmetic operations
  • Densitometry
  • Surface analysis
  • Integration of MATLAB® engine
  • Network statistics
Present and Teach

Create high quality demos with event-based timeline for interactive
presentations with or without stereoscopic displays. Export demos
as movie clips and animations:

  • Animation tools
  • High quality demos
  • Movie generation
  • Various 3D stereo display modes
  • Autostereoscopic display support
  • 2D and 3D annotation